Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. USP12, Ubiquitin specific peptidase 12
Sequence ID:NM_182488
Entrez Gene ID:219333
Ensembl ID:ENSG00000152484

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:13q12.13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:13: 27640292 - 27745881

NM_182488 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
132352764028627643520
323633142764520727645285
331535122764932727649524
351335962766401927664102
359736732766421827664294
367439032766973727669966
390441172767986727680080
411841982769065227690732
419945032774572827746032

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4830251Full LengthBC026072ubiquitin specific peptidase 12

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_872294  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_182488 NP_872294 O75317 EC 3.4.19.12 UCH

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF022789 AAC23551 O75317 EC 3.4.19.12
BC026072 AAH26072 O75317 EC 3.4.19.12
DQ894074 ABM85000    
AK289685 BAF82374 O75317 EC 3.4.19.12

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens USP12 NP_872294 M.musculus Usp12 22217 Gene Info NP_035799 98
R.norvegicus Usp12 360763   NP_001160048 98
A.thaliana UBP3 830150   NP_568074 62
A.thaliana UBP4 816763   NP_565532 60
S.cerevisiae UBP9 856835   NP_011024 44
S.cerevisiae UBP13 852212   NP_009486 41

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)