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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SLC35A1, solute carrier family 35 (CMP-sialic acid transporter), member A1
Sequence ID:NM_001168398
NM_006416
RefSeqGene ID:NG_016207
Entrez Gene ID:10559
Ensembl ID:ENSG00000164414

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
CONGENITAL DISORDER OF GLYCOSYLATION, TYPE IIF 

Cytogenetic Location (from UniGene)

Cytogenetic Location:6q15Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 88182706 - 88221626

 Exon Info From UCSC:
NM_001168398
NM_006416

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4690513Full LengthBC017807solute carrier family 35 (CMP-sialic acid transporter), member A1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006407  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001168398 NP_001161870    
NM_006416 NP_006407 P78382 Nuc_sug_transp

Related Sequences

 
mRNAGenPeptSwissProt
BC017807 AAH17807 P78382
HQ447661 ADQ32146  
D87969 BAA13522 P78382
AK293696 BAG57132 B4DEM1
AK299432 BAG61410 B4DRU8
AJ810302 CAH17780 Q6A0F3
AJ810303 CAH17781 Q6A0F2
AL122119 CAH56397 Q659E4
AJ851888 CAH65468 P78382
AJ851889 CAH65469 Q5W1L7
AJ851890 CAH65470 Q5W1L6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SLC35A1 NP_006407 R.norvegicus Slc35a1 313139   NP_001101394 93
M.musculus Slc35a1 24060 Gene Info NP_036025 92
C.elegans ugtp-1 176227   NP_498930 41
A.thaliana AT4G35335 829687   NP_680766 10

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)