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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. S100B, S100 calcium binding protein B
Sequence ID:NM_006272
Entrez Gene ID:6285
Ensembl ID:ENSG00000160307

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:21q22.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:21: 48018874 - 48024986

NM_006272 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
18864801853048019415
88710254802219048022328
102611354802492548025034

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3543825Full LengthBC001766S100 calcium binding protein B
5300855IncompleteBC041935S100 calcium binding protein, beta (neural)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006263  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_006272 NP_006263 P04271 efhand
S_100

Related Sequences

 
mRNAGenPeptSwissProt
BC001766 AAH01766 P04271
DQ892491 ABM83417  
EU176695 ABW03496  
CR542123 CAG46920 P04271

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens S100B NP_006263 M.musculus S100b 20203 Gene Info NP_033141 99
R.norvegicus S100b 25742   NP_037323 98

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)