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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. SPCS3, signal peptidase complex subunit 3 homolog (S. cerevisiae)
Sequence ID:NM_021928
Entrez Gene ID:60559
Ensembl ID:ENSG00000129128

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4q34.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:4: 177241114 - 177250354

NM_021928 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1281177241089177241369
282355177243320177243393
356432177245331177245407
433548177248312177248427
5494594177249348177253393

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5224927Full LengthBC047290signal peptidase complex subunit 3 homolog (S. cerevisiae)
5745446IncompleteBC053883signal peptidase complex subunit 3 homolog (S. cerevisiae)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_068747  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_021928 NP_068747 P61009 SPC22

Related Sequences

 
mRNAGenPeptSwissProt
BC047290 AAH47290 P61009
AY359044 AAQ89403 P61009
EU831735 ACE86569  
EU831652 ACE87252  
HQ448610 ADQ33088  
AK026302 BAB15437 P61009
AL136660 CAB66595 P61009

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SPCS3 NP_068747 M.musculus Spcs3 76687 Gene Info NP_083977 100
R.norvegicus Spcs3 680782   XP_001058844 99
D.melanogaster Spase22-23 42885   NP_651234 57
C.elegans K12H4.4 176133   NP_498755 49
A.thaliana AT3G05230 819687   NP_566250 39
A.thaliana AT5G27430 832802   NP_198095 37

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)