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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PISD, phosphatidylserine decarboxylase
Sequence ID:NM_014338
Entrez Gene ID:23761
Ensembl ID:ENSG00000241878

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:22q12.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:22: 32014476 - 32016549

NM_014338 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1513603201447632015821
136115213201653832016698
152216683201698132017127
166918073201731932017457
180820443201763432017870
204522103201966932019834
221124643202174832022001
246526723202398832024195
267326933202678932026809

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3508281Full LengthBC001482phosphatidylserine decarboxylase
4111676IncompleteBC009315phosphatidylserine decarboxylase

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_055153  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_014338 NP_055153   PS_Dcarbxylase

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF035304 AAB88186 Q9UG56 EC 4.1.1.65
BC001482 AAH01482 Q9UG56 EC 4.1.1.65
BC009315 AAH09315 Q9UG56 EC 4.1.1.65
DQ895456 ABM86382    
EU176676 ABW03477    
EU176340 ABW03791    
AK298474 BAG60685 B4DPS3  
AL050371 CAB43678 Q9UG56 EC 4.1.1.65
CR456540 CAG30426 Q9UG56 EC 4.1.1.65
CU013140 CAK54571    
CU013428 CAK54870    
AM393633 CAL38509    

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PISD NP_055153 M.musculus Pisd 320951 Gene Info NP_796272 92
R.norvegicus Pisd 681361   XP_001061408 81
S.cerevisiae PSD1 855552   NP_014230 52
S.pombe SPAC25B8.03 2541447   NP_594463 52
N.crassa NCU03695 3877635   XP_961471 49
C.elegans psd-1 176027   NP_001021128 43

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)