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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. SHROOM4, shroom family member 4
Sequence ID:NM_020717
NR_027121
RefSeqGene ID:NG_011882
Entrez Gene ID:57477
Ensembl ID:ENSG00000158352

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
STOCCO DOS SANTOS X-LINKED MENTAL RETARDATION SYNDROME 

Cytogenetic Location (from UniGene)

Cytogenetic Location:Xp11.22Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:X: 50334646 - 50557044

NM_020717 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1253335033464250339963
533456035034126550341534
560457845034563250345812
578565885035038050351183
658966505037061350370674
665191415037617750378667
914292765038117350381307
927794285043878550438936
942995715055690150557043

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8860513Full LengthBC151240shroom family member 4

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_020717 NP_065768 Q9ULL8  

Related Sequences

 
mRNAGenPeptSwissProt
BC151240 AAI51241 Q9ULL8
AY044234 AAK95579 Q9ULL8
AB033028 BAA86516 Q9ULL8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SHROOM4 NP_065768 M.musculus Shroom4 208431 Gene Info NP_001035549 79
R.norvegicus Shroom4 317391   XP_228786 78

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)