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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. UBE2V1, ubiquitin-conjugating enzyme E2 variant 1
Sequence ID:NM_001032288
NM_001257393
NM_001257394
NM_001257395
NM_001257396
NM_001257397
NM_001257398
NM_001257399
NM_021988
NM_022442
NM_199144
NR_047553
NR_047554
NR_047555
NR_047556
RefSeqGene ID:NG_029526
Entrez Gene ID:7335
Ensembl ID:ENSG00000244687

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:20q13.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:20: 48740704 - 48770247

 Exon Info From UCSC:
NM_001032288
NM_021988
NM_022442
NM_199144

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2961017Full LengthBC000468ubiquitin-conjugating enzyme E2 variant 1
2960953IncompleteBC008944ubiquitin-conjugating enzyme E2 variant 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_954595  NP_954673  NP_068823  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001032288 NP_001027459    
NM_001162505 NP_001155977    
NM_001257393 NP_001244322    
NM_001257394 NP_001244323    
NM_001257395 NP_001244324    
NM_001257396 NP_001244325    
NM_001257397 NP_001244326    
NM_001257398 NP_001244327    
NM_001257399 NP_001244328    
NM_021988 NP_068823   UQ_con
NM_022442 NP_071887    
NM_199129 NP_954580    
NM_199144 NP_954595   UQ_con
NM_199203 NP_954673   UQ_con

Related Sequences

 
mRNAGenPeptSwissProt
U39360 AAB72015 Q13404
U39361 AAB72016 Q13404
U97280 AAC02755 Q13404
U97281 AAC02756 Q13404
U97279 AAC02780 Q13404
AF155120 AAF08702 A5PLL7
AY008273 AAG24229 Q13404
BC000468 AAH00468 Q13404
BC008944 AAH08944 Q13404
BC140089 AAI40090  
BC142966 AAI42967 A5PLL7
BC143091 AAI43092  
BC172339 AAI72339  
BT007382 AAP36046 Q13404
HQ448675 ADQ33153  
AK023028 BAB14364 A5PLL7
AB044550 BAB18652 A5PLL7
AK304595 BAG65381 Q5TGE2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens UBE2V1 NP_001027459 M.musculus Ube2v1 66589 Gene Info NP_075719 94
A.gambiae AgaP_AGAP006937 1270148   XP_001688097 71
D.melanogaster Uev1A 38613   NP_647959 67
P.falciparum PFC0255c 814375   XP_001351133 49

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)