Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ATP5D, ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit
Sequence ID:NM_001001975
NM_001687
Entrez Gene ID:513
Ensembl ID:ENSG00000099624

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, t-cell, testis, uncharacterized tissue, uterus
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:19p13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:19: 1241748 - 1244824

 Exon Info From UCSC:
NM_001001975
NM_001687

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2819749Full LengthBC002389ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit
2819749Full LengthBC004426ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit
4798666Full LengthBC018079ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit
5229155IncompleteBC058927ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit
5770003IncompleteBC050458ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001001975  NP_001678  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001001975 NP_001001975 P30049 ATP-synt_DE
ATP-synt_DE_N
NM_001687 NP_001678 P30049 ATP-synt_DE
ATP-synt_DE_N

Related Sequences

 
mRNAGenPeptSwissProt
S87916 AAA08055 P30049
BC002389 AAH02389 P30049
BC004426 AAH04426 P30049
BC018079 AAH18079 P30049
S87918 ABB76284 P30049
X63422 CAA45016 P30049
X63423 CAA45017 P30049
CR542218 CAG47014 P30049

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ATP5D NP_001001975 R.norvegicus Atp5d 245965   NP_620806 87
M.musculus Atp5d 66043 Gene Info NP_079589 86
A.gambiae AgaP_AGAP007841 1278118   XP_317657 52
C.elegans F58F12.1 174059   NP_495286 52
D.melanogaster l(1)G0230 31950   NP_572610 49
S.cerevisiae ATP16 851560   NP_010280 38
S.pombe atp16 2540185   NP_596259 35
N.crassa NCU00385 3873434   XP_957271 34

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)