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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SPTB, Spectrin, beta, erythrocytic
Sequence ID:NM_001024858
NM_000347
RefSeqGene ID:NG_016202
Entrez Gene ID:6710
Ensembl ID:ENSG00000070182

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:14q23-q24.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:14: 65215672 - 65346601

 Exon Info From UCSC:
NM_001024858
NM_000347

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9020271Full LengthBC136284spectrin, beta, erythrocytic
9020272Full LengthBC136285spectrin, beta, erythrocytic
3538218IncompleteBC010434spectrin, beta, erythrocytic

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001020029  NP_000338  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_000347 NP_000338 P11277 CH
Spectrin
NM_001024858 NP_001020029   PH
CH
Spectrin

Related Sequences

 
mRNAGenPeptSwissProt
M37885 AAA60571 P11277
M18054 AAA60572 P11277
J05500 AAA60578 P11277
J05500 AAA60579 P11277
M37884 AAA63259 P11277
BC136284 AAI36285 B2RMN7
BC136285 AAI36286 B2RMN7
AF465439 AAL73492 Q8WX82
AB209415 BAD92652 Q59FP5
X59510 CAA42097 P11277
X59511 CAA42098 P11277
BX248270 CAD62598 Q86TX9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SPTB NP_001020029 M.musculus Spnb1 20741 Gene Info NP_038703 91
R.norvegicus Sptb 314251   NP_997687 90

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)