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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CCNA1, cyclin A1
Sequence ID:NM_001111045
NM_001111046
NM_001111047
NM_003914
Entrez Gene ID:8900
Ensembl ID:ENSG00000133101

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:13q12.3-q13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:13: 37006631 - 37017007

 Exon Info From UCSC:
NM_001111045
NM_001111046
NM_001111047
NM_003914

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5172478Full LengthBC036346cyclin A1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003905  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001111045 NP_001104515    
NM_001111046 NP_001104516    
NM_001111047 NP_001104517    
NM_003914 NP_003905 P78396 Cyclin_N
Cyclin_C

Related Sequences

 
mRNAGenPeptSwissProt
U66838 AAB49754 P78396
U97680 AAB60863 P78396
BC036346 AAH36346 P78396
BT019577 AAV38384 P78396
DQ891303 ABM82229  
DQ894488 ABM85414  
AK314261 BAG36926 B2RAM9
AK301897 BAH13579 P78396
AK316392 BAH14763 P78396
AM393372 CAL38250  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CCNA1 NP_003905 R.norvegicus Ccna1 295052   NP_001011949 85
M.musculus Ccna1 12427 Gene Info NP_031654 84
A.thaliana CYCA1;2 844075   NP_177863 43

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta