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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ALX1, ALX homeobox 1
Sequence ID:NM_006982
RefSeqGene ID:NG_023202
Entrez Gene ID:8092
Ensembl ID:ENSG00000180318

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12q21.31Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 85674033 - 85695561

NM_006982 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12308567403585674264
2315358567734985677653
5366648568063085680758
66512918569493285695558

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4278460Full LengthBC010923ALX homeobox 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_008913  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_006982 NP_008913 Q15699 Homeobox
OAR

Related Sequences

 
mRNAGenPeptSwissProt
U31986 AAB08960 Q15699
BC010923 AAH10923 Q15699

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ALX1 NP_008913 M.musculus Alx1 216285 Gene Info NP_766141 97
R.norvegicus Alx1 25401   NP_037053 96

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)