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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. ABCA4, ATP-binding cassette, sub-family A (ABC1), member 4
Sequence ID:NM_000350
RefSeqGene ID:NG_009073
Entrez Gene ID:24
Ensembl ID:ENSG00000198691

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
CONE-ROD DYSTROPHY 3 
FUNDUS FLAVIMACULATUSCNGB3
MACULAR DEGENERATION, AGE-RELATED, 2 
RETINITIS PIGMENTOSA 19 

Cytogenetic Location (from UniGene)

Cytogenetic Location:1p22Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 94458395 - 94586691

 Exon Info From UCSC:
NM_000350

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100069259Full LengthBC172565ATP-binding cassette, sub-family A (ABC1), member 4
100068956BC172262ATP-binding cassette, sub-family A (ABC1), member 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000341  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_000350 NP_000341 P78363 ABC_tran

Related Sequences

 
mRNAGenPeptSwissProt
AF001945 AAC05632 P78363
AF000148 AAC23915 P78363
U88667 AAC51144 P78363
BC172262 AAI72262  
BC172565 AAI72565  
DQ426859 ABD90529 Q0QD48
AB210040 BAE06122 P78363
AK295818 BAG58635 B4DIX3
AK301733 BAG63198 B4DWY6
AK301764 BAG63224 B4DX12
AK296896 BAH12450 B7Z464
CR627391 CAH10486 Q6AI28

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ABCA4 NP_000341 M.musculus Abca4 11304 Gene Info NP_031404 88
R.norvegicus Abca4 310836   NP_001101191 88
C.elegans abt-2 171782   NP_490949 36

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)