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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. KCNA1, potassium voltage-gated channel, shaker-related subfamily, member 1 (episodic ataxia with myokymia)
Sequence ID:NM_000217
RefSeqGene ID:NG_011815
Entrez Gene ID:3736
Ensembl ID:ENSG00000111262

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
EPISODIC ATAXIA/MYOKYMIA SYNDROME 

Cytogenetic Location (from UniGene)

Cytogenetic Location:12p13.32Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 5024656 - 5027413

NM_000217 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
156650190725019637
567798150200055027419

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8069239Full LengthBC101733potassium voltage-gated channel, shaker-related subfamily, member 1 (episodic ataxia with myokymia)
8327648Full LengthBC112180potassium voltage-gated channel, shaker-related subfamily, member 1 (episodic ataxia with myokymia)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000208  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_000217 NP_000208 Q09470 Ion_trans
K_tetra

Related Sequences

 
mRNAGenPeptSwissProt
L02750 AAA36139 Q09470
BC101733 AAI01734 Q09470
BC112180 AAI12181 Q09470

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens KCNA1 NP_000208 R.norvegicus Kcna1 24520   NP_775118 98
M.musculus Kcna1 16485 Gene Info NP_034725 98

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta