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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. S100A8, S100 calcium binding protein A8
Sequence ID:NM_002964
Entrez Gene ID:6279
Ensembl ID:ENSG00000143546

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1q21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 153362509 - 153363549

NM_002964 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
22232153362508153362718
233395153362870153363032
396428153363516153363548

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4246359Full LengthBC005928S100 calcium binding protein A8

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002955  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_002964 NP_002955 P05109 efhand
S_100

Related Sequences

 
mRNAGenPeptSwissProt
BC005928 AAH05928 P05109
BT007378 AAP36042 P05109
DQ893495 ABM84421  
DQ896367 ABM87366  
AK291328 BAF84017 P05109
X06234 CAA29580 P05109
Y00278 CAA68390 P05109
CR407674 CAG28602 P05109

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens S100A8 NP_002955 R.norvegicus S100a8 116547   NP_446274 63
M.musculus S100a8 20201 Gene Info NP_038678 58

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)