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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. IFT27, intraflagellar transport 27 homolog (Chlamydomonas)
Sequence ID:NM_001177701
NM_006860
NR_033531
NM_001177702
Entrez Gene ID:11020
Ensembl ID:ENSG00000100360

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:22q13.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:22: 37163170 - 37172137

 Exon Info From UCSC:
NM_001177701
NM_006860
NM_001177702

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3163341Full LengthBC000566RAB, member of RAS oncogene family-like 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006851  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001177701 NP_001171172 Q9BW83  
NM_006860 NP_006851   Ras
Miro

Related Sequences

 
mRNAGenPeptSwissProt
BC000566 AAH00566 Q9BW83
BT006815 AAP35461 Q9BW83
AB209424 BAD92661 I7FU17
AL022729 CAA18787 Q9BW83
CR456558 CAG30444 Q9BW83
CU013158 CAK54589  
CU013446 CAK54888  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens IFT27 NP_001171172 R.norvegicus Ift27 300062   NP_001123967 85
M.musculus Ift27 67042 Gene Info NP_080207 84

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)