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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. ST3GAL5, ST3 beta-galactoside alpha-2,3-sialyltransferase 5
Sequence ID:NM_001042437
NM_003896
RefSeqGene ID:NG_012807
Entrez Gene ID:8869
Ensembl ID:ENSG00000115525

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Associated Diseases (from OMIM)

DiseaseOther Genes
AMISH INFANTILE EPILEPSY SYNDROME 

Cytogenetic Location (from UniGene)

Cytogenetic Location:2p11.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 86066273 - 86116137

 Exon Info From UCSC:
NM_001042437
NM_003896

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6163586Full LengthBC065936ST3 beta-galactoside alpha-2,3-sialyltransferase 5
4025692IncompleteBC009887ST3 beta-galactoside alpha-2,3-sialyltransferase 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003887  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001042437 NP_001035902      
NM_003896 NP_003887 Q9UNP4 EC 2.4.99.9 Glyco_transf_29

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF105026 AAD14634 Q9UNP4 EC 2.4.99.9
AF161396 AAF28956 Q9P0A3  
AF119415 AAF66146 Q9UNP4 EC 2.4.99.9
BC065936 AAH65936 Q9UNP4 EC 2.4.99.9
AY152815 AAO16866 Q9UNP4 EC 2.4.99.9
AY359105 AAQ89463 Q9UNP4 EC 2.4.99.9
AB018356 BAA33950 Q9UNP4 EC 2.4.99.9
AK001340 BAG50894 Q9UNP4 EC 2.4.99.9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ST3GAL5 NP_003887 M.musculus St3gal5 20454 Gene Info NP_001030305 84
R.norvegicus St3gal5 83505   NP_112627 83

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)