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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. USF1, upstream transcription factor 1
Sequence ID:NM_007122
NM_207005
RefSeqGene ID:NG_011612
Entrez Gene ID:7391
Ensembl ID:ENSG00000158773

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
COMBINED HYPERLIPIDEMIA,FAMILIALLPL
HYPERLIPIDEMIA, FAMILIAL COMBINED 

Cytogenetic Location (from UniGene)

Cytogenetic Location:1q22-q23Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 161009709 - 161012672

 Exon Info From UCSC:
NM_007122
NM_207005

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4559819Full LengthBC035505upstream transcription factor 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_009053  NP_996888  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_007122 NP_009053 P22415 HLH
NM_207005 NP_996888 Q7Z5Y1 HLH

Related Sequences

 
mRNAGenPeptSwissProt
BC035505 AAH35505 P22415
AB098540 BAC78384 Q7Z5Y1
AK314876 BAG37391 P22415
X55666 CAA39201 P22415
AM392755 CAL37633  
AM393836 CAL38711  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens USF1 NP_009053 M.musculus Usf1 22278 Gene Info NP_033506 98
R.norvegicus Usf1 83586   NP_113965 98

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)