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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. NDC80, NDC80 kinetochore complex component homolog (S. cerevisiae)
Sequence ID:NM_006101
Entrez Gene ID:10403
Ensembl ID:ENSG00000080986

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:18p11.32Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:18: 2571604 - 2616628

 Exon Info From UCSC:
NM_006101

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5164424Full LengthBC035617NDC80 homolog, kinetochore complex component (S. cerevisiae)
3677694IncompleteBC010171NDC80 homolog, kinetochore complex component (S. cerevisiae)
3997364IncompleteBC005239NDC80 homolog, kinetochore complex component (S. cerevisiae)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006092  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_006101 NP_006092 O14777 Ndc80_HEC

Related Sequences

 
mRNAGenPeptSwissProt
AF017790 AAB80726 O14777
BC005239 AAH05239 Q05DQ6
BC035617 AAH35617 O14777
DQ890765 ABM81691  
DQ893928 ABM84854  
AK289396 BAF82085 A8K031
AK313184 BAG36001 A8K031

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens NDC80 NP_006092 R.norvegicus Ndc80 301701   NP_001119742 85
M.musculus Ndc80 67052 Gene Info NP_075783 84
A.thaliana AT3G54630 824628   NP_191024 28
C.elegans ndc-80 177873   NP_501830 25
N.crassa NCU03899 3873692   XP_957538 25
S.pombe ndc80 2540097   NP_596392 24
S.cerevisiae TID3 854662   NP_012122 23

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)