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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. HTR3A, 5-hydroxytryptamine (serotonin) receptor 3A, ionotropic
Sequence ID:NM_000869
NM_001161772
NM_213621
NR_046363
RefSeqGene ID:NG_013058
Entrez Gene ID:3359
Ensembl ID:ENSG00000166736

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11q23.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 113846047 - 113860485

 Exon Info From UCSC:
NM_000869
NM_001161772
NM_213621

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2819400Full LengthBC0044535-hydroxytryptamine (serotonin) receptor 3A
2821710Full LengthBC0023545-hydroxytryptamine (serotonin) receptor 3A

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_998786  NP_000860  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_000869 NP_000860 P46098 Neur_chan_LBD
Neur_chan_memb
NM_001161772 NP_001155244    
NM_213621 NP_998786   Neur_chan_LBD
Neur_chan_memb

Related Sequences

 
mRNAGenPeptSwissProt
S82612 AAB37533 P46098
BC002354 AAH02354 P46098
BC004453 AAH04453 P46098
AF498984 AAM21131 P46098
BT007204 AAP35868 P46098
BT008266 AAP36958  
DQ892003 ABM82929  
DQ895193 ABM86119  
D49394 BAA08387 P46098
AK313896 BAG36619 B2R9S2
AK299973 BAG61798 P46098
AK304630 BAG65410 B4E398
AJ003078 CAA05851 P46098
AJ003079 CAA05852 P46098
AJ003080 CAA05853  
AJ003080 CAA05854 Q9UEP2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens HTR3A NP_998786 M.musculus Htr3a 15561 Gene Info NP_038589 85
R.norvegicus Htr3a 79246   NP_077370 85

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)