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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PSME4, proteasome (prosome, macropain) activator subunit 4
Sequence ID:NM_014614
Entrez Gene ID:23198
Ensembl ID:ENSG00000068878

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, placenta, pooled tissue, prostate, retina, skin, soft tissue, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:2p16.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 54127018 - 54198139

 Exon Info From UCSC:
NM_014614

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8322720Full LengthBC113668proteasome (prosome, macropain) activator subunit 4
8327637Full LengthBC112169proteasome (prosome, macropain) activator subunit 4
4247432IncompleteBC062760proteasome (prosome, macropain) activator subunit 4
5406676IncompleteBC043602proteasome (prosome, macropain) activator subunit 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_055429  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_014614 NP_055429 Q14997 HEAT

Related Sequences

 
mRNAGenPeptSwissProt
BC043602 AAH43602 Q14997
BC071768 AAH71768 Q14997
BC112169 AAI12170 Q14997
BC113668 AAI13669 Q14997
AY894754 AAX83869 Q14997
AY894755 AAX83870 Q14997
AY894756 AAX83871 Q14997
D38521 BAA07526 Q14997
AB621805 BAK64141 G1UI18

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PSME4 NP_055429 M.musculus Psme4 103554 Gene Info NP_598774 96
R.norvegicus Psme4 498433   NP_001020311 96
A.gambiae AgaP_AGAP002597 1273372   XP_312339 37
C.elegans C14C10.5 179726   NP_506153 33
A.thaliana PA200 820533   NP_187941 28

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)