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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. PPFIA3, protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3
Sequence ID:NM_003660
Entrez Gene ID:8541
Ensembl ID:ENSG00000177380

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19q13.33Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:19: 49622662 - 49654278

 Exon Info From UCSC:
NM_003660

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8069024Full LengthBC101518protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3
8069026Full LengthBC101520protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3
3528075IncompleteBC021255protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003651  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_003660 NP_003651 O75145 SAM_1
SAM_2

Related Sequences

 
mRNAGenPeptSwissProt
AF034800 AAC26101 O75145
BC021255 AAH21255 O75145
BC101518 AAI01519 O75145
BC101520 AAI01521 O75145
AB014554 BAA31629 O75145
AK023850 BAB14702 O75145
AK289757 BAF82446 O75145
AK293798 BAG57209 B4DEU8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PPFIA3 NP_003651 M.musculus Ppfia3 76787 Gene Info NP_084017 98
R.norvegicus Ppfia3 140591   XP_341857 98

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)