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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SLC6A20, solute carrier family 6 (proline IMINO transporter), member 20
Sequence ID:NM_020208
NM_022405
RefSeqGene ID:NG_023204
Entrez Gene ID:54716
Ensembl ID:ENSG00000163817

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
HYPERGLYCINURIASLC36A2
SLC6A19
IMINOGLYCINURIA, DIGENICSLC36A2
SLC6A19

Cytogenetic Location (from UniGene)

Cytogenetic Location:3p21.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 45812708 - 45837913

 Exon Info From UCSC:
NM_020208
NM_022405

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8991913Full LengthBC126197solute carrier family 6 (proline IMINO transporter), member 20
9020420Full LengthBC136431solute carrier family 6 (proline IMINO transporter), member 20
9052607Full LengthBC144087solute carrier family 6 (proline IMINO transporter), member 20

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_064593  NP_071800  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_020208 NP_064593 Q9NP91 SNF
NM_022405 NP_071800   SNF

Related Sequences

 
mRNAGenPeptSwissProt
AF075260 AAC27755 Q9NP91
BC126197 AAI26198 Q9NP91
BC136431 AAI36432 Q9NP91
BC144087 AAI44088 B7ZLW4
AF125107 AAL75944 Q9NP91
HQ258580 ADR83334  
AL389979 CAB97535 Q9NP91
AJ276207 CAB99310 Q9NP91
AJ276208 CAB99311 Q9NP91

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SLC6A20 NP_064593 M.musculus Slc6a20a 102680 Gene Info NP_631881 92
R.norvegicus Slc6a20 113918   NP_579830 91

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)