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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. NPHS2, nephrosis 2, idiopathic, steroid-resistant (podocin)
Sequence ID:NM_014625
RefSeqGene ID:NG_007535
Entrez Gene ID:7827
Ensembl ID:ENSG00000116218

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
NEPHROTIC SYNDROME, TYPE 2 

Cytogenetic Location (from UniGene)

Cytogenetic Location:1q25.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 179519675 - 179545068

NM_014625 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
26935179519676179520585
9361014179521737179521815
10151070179523610179523665
10711274179526161179526364
12751357179528813179528895
13581430179530423179530495
14311534179533824179533927
15351893179544725179545083

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5187188Full LengthBC029141nephrosis 2, idiopathic, steroid-resistant (podocin)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_055440  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_014625 NP_055440 Q9NP85 Band_7

Related Sequences

 
mRNAGenPeptSwissProt
BC029141 AAH29141 Q9NP85
AJ279254 CAB83216 Q9NP85

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens NPHS2 NP_055440 M.musculus Nphs2 170484 Gene Info NP_569723 86
R.norvegicus Nphs2 170672   NP_570841 84

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)