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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. STAG1, Stromal antigen 1
Sequence ID:NM_005862
Entrez Gene ID:10274
Ensembl ID:ENSG00000118007

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal medulla, b-cell, bone, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, skin, soft tissue, stem cell, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:3q22.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 136056243 - 136471210

 Exon Info From UCSC:
NM_005862

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30342305Full LengthBC064699stromal antigen 1
3450853IncompleteBC017735stromal antigen 1

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_005862 NP_005853 Q8WVM7  

Related Sequences

 
mRNAGenPeptSwissProt
BC017735 AAH17735 Q8WVM7
BC064699 AAH64699 Q6P275
AB210023 BAE06105 Q4LE48
AK304381 BAG65219 B4E2Q7
Z75330 CAA99731 Q8WVM7
CR749247 CAH18103 Q68DW7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens STAG1 NP_005853 M.musculus Stag1 20842 Gene Info NP_033308 99
R.norvegicus Stag1 315958   NP_001101649 99
A.gambiae AgaP_AGAP006998 1270101   XP_308771 49
D.melanogaster SA 33974   NP_477268 49
A.thaliana SCC3 819410   NP_566119 28

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)