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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. OLR1, oxidized low density lipoprotein (lectin-like) receptor 1
Sequence ID:NM_001172632
NM_001172633
NM_002543
RefSeqGene ID:NG_016743
Entrez Gene ID:4973
Ensembl ID:ENSG00000173391

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
MYOCARDIAL INFARCTIONESR1
F13A1
F7
GCLC
GCLM
ITGB3
LGALS2
LRP8
LTA
MIAT
PSMA6
THBD
TNFSF4

Cytogenetic Location (from UniGene)

Cytogenetic Location:12p13.2-p12.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 10310901 - 10324737

 Exon Info From UCSC:
NM_001172632
NM_001172633
NM_002543

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4722086Full LengthBC022295oxidized low density lipoprotein (lectin-like) receptor 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002534  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001172632 NP_001166103    
NM_001172633 NP_001166104    
NM_002543 NP_002534 P78380 Lectin_C

Related Sequences

 
mRNAGenPeptSwissProt
AF035776 AAC82329 P78380
BC022295 AAH22295 P78380
DQ891409 ABM82335  
DQ894585 ABM85511  
AB010710 BAA24580 P78380
AB102861 BAC81565 P78380
AK292124 BAF84813 P78380
AK295409 BAG58360 P78380
AK298040 BAG60339 B4DNS7
AK316353 BAH14724 B7ZAN8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens OLR1 NP_002534 R.norvegicus Olr1 140914   NP_579840 66
M.musculus Olr1 108078 Gene Info NP_619589 61

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)