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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. KLHDC3, kelch domain containing 3
Sequence ID:NM_057161
NR_040101
NM_001242872
Entrez Gene ID:116138
Ensembl ID:ENSG00000124702

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, placenta, pooled tissue, prostate, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:6p21.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 42981976 - 42989028


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2819570Full LengthBC000295kelch domain containing 3
3349731Full LengthBC007296kelch domain containing 3
3351635Full LengthBC021546kelch domain containing 3
3352397Full LengthBC001793kelch domain containing 3
3355470Full LengthBC001789kelch domain containing 3
3537223Full LengthBC009460kelch domain containing 3
5288540Full LengthBC041793kelch domain containing 3
5313255Full LengthBC045612kelch domain containing 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_476502  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_057161 NP_476502 Q9BQ90 Kelch_1
Kelch_2

Related Sequences

 
mRNAGenPeptSwissProt
BC000295 AAH00295 Q9BQ90
BC001789 AAH01789 Q9BQ90
BC001793 AAH01793 Q9BQ90
BC007296 AAH07296 Q9BQ90
BC009460 AAH09460 Q96GH7
BC021546 AAH21546 Q9BQ90
BC041793 AAH41793 Q8IVW5
BC045612 AAH45612 Q8IVW5
HQ448243 ADQ32723  
AB055925 BAB63257 Q9BQ90
AK097719 BAC05149 Q8N7S8
AK290384 BAF83073 Q9BQ90
AK302336 BAG63666 B4DYA4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens KLHDC3 NP_476502 M.musculus Klhdc3 71765 Gene Info NP_001157201 97
R.norvegicus Klhdc3 363192   NP_001012203 97
A.gambiae AgaP_AGAP009495 1271415   XP_310200 51
D.melanogaster CG12081 31799   NP_572494 50
C.elegans F53E4.1 180050   NP_506895 46
A.thaliana AT1G18610 838442   NP_173296 32
A.thaliana AT1G74150 843755   NP_177555 27

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)