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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CERS1, ceramide synthase 1
Sequence ID:NM_021267
NM_198207
RefSeqGene ID:NG_012070
Entrez Gene ID:10715
Ensembl ID:ENSG00000223802

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19p12Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:19: 18980842 - 18990059

 Exon Info From UCSC:
NM_021267
NM_198207

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6192817Full LengthBC084582LAG1 homolog, ceramide synthase 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001483  NP_067090  NP_937850  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001492 NP_001483 P27539 TGF_beta
NM_021267 NP_067090 P27544 LAG1
NM_198207 NP_937850   LAG1

Related Sequences

 
mRNAGenPeptSwissProt
M62302 AAA58500 P27544
M62302 AAA58501 P27539
BC084582 AAH84582 Q5XG75
AB209169 BAD92406 Q59GE0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CERS1 NP_067090 M.musculus Lass1 93898   NP_619588 81
R.norvegicus Cers1 290658   NP_001037695 81
C.elegans lagr-1 189370   NP_493403 39

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)