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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. KRT7, keratin 7
Sequence ID:NM_005556
RefSeqGene ID:NG_012296
Entrez Gene ID:3855
Ensembl ID:ENSG00000135480

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12q13.13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 52627027 - 52642544

NM_005556 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
14515262695352627403
4526635262893852629149
6647245263129252631352
7258205263246352632558
8219855263525552635419
98611115263679552636920
111213325263919552639415
133313675264196052641994
136817025264237452642708

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3610347Full LengthBC002700keratin 7
3638955IncompleteBC009521keratin 7
5743968IncompleteBC042076keratin 7
40014155IncompleteBC107083keratin 7

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_005556 NP_005547 P08729  

Related Sequences

 
mRNAGenPeptSwissProt
BC002700 AAH02700 P08729
BC009521 AAH09521 Q96GE1
BC107082 AAI07083 Q3KNV1
BC107083 AAI07084 Q3B834
AF509887 AAN64031 P08729
DQ892996 ABM83922  
DQ896244 ABM87243  
AK128848 BAG54741 B3KY79
X03212 CAA26956 P08729
AJ238246 CAB41416 P08729

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens KRT7 NP_005547 M.musculus Krt7 110310 Gene Info NP_149064 83
R.norvegicus Krt7 300242   NP_001041335 83

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)