Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. GALNTL2, UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2
Sequence ID:NM_054110
Entrez Gene ID:117248
Ensembl ID:ENSG00000131386

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3p25.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 16216658 - 16269007

NM_054110 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
110141621618316217196
101511811623726616237432
118213861624212516242329
138715541625000916250176
155516721625263016252747
167318671625407516254269
186819991626090916261040
200021041626141616261520
210522481626412116264264
224946401626886016271251

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4212702Full LengthBC014789UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_473451  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_054110 NP_473451 Q8N3T1 EC 2.4.1.41 Glycos_transf_2
Ricin_B_lectin

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC014789 AAH14789 Q8N3T1 EC 2.4.1.41
BC030625 AAH30625 Q4G146  
AF361251 AAK48940 Q96KE1  
AY035399 AAK63127 Q8N3T1 EC 2.4.1.41
AY358443 AAQ88808 Q8N3T1 EC 2.4.1.41
DQ891053 ABM81979    
DQ894232 ABM85158    
AB078149 BAD29961 Q8N3T1 EC 2.4.1.41
AK312425 BAG35335 Q8N3T1 EC 2.4.1.41
AK094780 BAG52928 B3KT16  
AL831925 CAD38585 Q8N3T1 EC 2.4.1.41
AJ505964 CAD44542 Q68VJ0  
AL832575 CAD89983 Q8N3T1 EC 2.4.1.41
AM392821 CAL37699    
AM393321 CAL38199    

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens GALNTL2 NP_473451 R.norvegicus LOC100360475 100360475   XP_002728420 79
M.musculus Galntl2 78754 Gene Info NP_084442 78

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)