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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. LRRC31, Leucine rich repeat containing 31
Sequence ID:NM_024727
Entrez Gene ID:79782
Ensembl ID:ENSG00000114248

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3q26.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 169557028 - 169587718

NM_024727 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
441116169557028169558100
11171284169565907169566074
12851452169569406169569573
14531620169572600169572767
16211788169574123169574290
17891956169574492169574659
19572124169578348169578515
21252268169579457169579600
22692508169587420169587659

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9052080Full LengthBC143569leucine rich repeat containing 31
40125952Full LengthBC117401leucine rich repeat containing 31

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_079003  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_024727 NP_079003 Q6UY01 LRR_1

Related Sequences

 
mRNAGenPeptSwissProt
BC117401 AAI17402 Q6UY01
BC143569 AAI43570 Q6UY01
AY358138 AAQ88505 Q6UY01
HQ258307 ADR83061  
AK026912 BAB15589 Q6UY01
AK097338 BAC05004 Q6UY01

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens LRRC31 NP_079003 R.norvegicus Lrrc31 310256   XP_226972 70