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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. FGD3, FYVE, RhoGEF and PH domain containing 3
Sequence ID:NM_001083536
NM_033086
Entrez Gene ID:89846
Ensembl ID:ENSG00000127084

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:Unknown

Chromosomal Position (from UCSC)

Chromosomal Position:9: 95736966 - 95798515

 Exon Info From UCSC:
NM_001083536
NM_033086

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5244790Full LengthBC032429FYVE, RhoGEF and PH domain containing 3
5751870Full LengthBC111054FYVE, RhoGEF and PH domain containing 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_149077  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001083536 NP_001077005 Q5JSP0  
NM_033086 NP_149077   PH
RhoGEF
FYVE

Related Sequences

 
mRNAGenPeptSwissProt
BC032429 AAH32429 Q5JSP0
BC111054 AAI11055 Q5JSP0
AY211386 AAP20645 Q5JSP0
EU832246 ACE86816  
EU832153 ACE87503  
AK000004 BAA92229 Q9NXY1
AK292676 BAF85365 A8K9G1
AK301974 BAG63386 B4DXH4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens FGD3 NP_001077005 M.musculus Fgd3 30938 Gene Info NP_056574 76
R.norvegicus Fgd3 361223   NP_001101879 76
C.elegans exc-5 177692   NP_001023039 32

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)