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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. NTRK3, neurotrophic tyrosine kinase, receptor, type 3
Sequence ID:NM_001007156
NM_001012338
NM_001243101
NM_002530
RefSeqGene ID:NG_029619
Entrez Gene ID:4916
Ensembl ID:ENSG00000140538

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:15q25Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:15: 88420019 - 88670453

 Exon Info From UCSC:
NM_001007156
NM_001012338
NM_002530

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4181574Full LengthBC013693neurotrophic tyrosine kinase, receptor, type 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001007157  NP_001012338  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001007156 NP_001007157 Q96CY4   ig
LRRNT
I-set
NM_001012338 NP_001012338 Q16288 EC 2.7.10.1 ig
LRRNT
I-set
Pkinase_Tyr
NM_001243101 NP_001230030      
NM_002530 NP_002521      

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
U05012 AAA75374 Q16288 EC 2.7.10.1
S76475 AAB33111 Q16288 EC 2.7.10.1
S76476 AAB33112 Q16288 EC 2.7.10.1
AF058389 AAC97478 O95192  
AF058390 AAC97479 O95193  
AF125808 AAF19762    
BC013693 AAH13693 Q96CY4  
AY065844 AAL40893 Q8WWU8  
BT007291 AAP35955 Q96CY4  
AK297160 BAH12511 B7Z4C5  
AK302504 BAH13730 B7Z7U4  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens NTRK3 NP_001012338 R.norvegicus Ntrk3 29613   NP_062121 97
M.musculus Ntrk3 18213 Gene Info NP_032772 97

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)