Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. DCAF7, DDB1 and CUL4 associated factor 7
Sequence ID:NM_005828
Entrez Gene ID:10238
Ensembl ID:ENSG00000136485

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:17q23.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 61670005 - 61671628

NM_005828 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
13556162782161628175
3565146165583061655988
5156266165669761656808
6277456165718561657303
7467726166086261660888
7739556166089061661072
95610736166257261662689
107463516166636161671638

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3458293Full LengthBC001264WD repeat domain 68
5122333IncompleteBC027489WD repeat domain 68

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_005828 NP_005819    

Related Sequences

 
mRNAGenPeptSwissProt
U94747 AAC18913 P61962
BC001264 AAH01264 P61962
DQ891233 ABM82159  
DQ894417 ABM85343  
AK294925 BAG58007 B4DH46
AK303212 BAG64301 B4E039

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens DCAF7 NP_005819 M.musculus Dcaf7 71833 Gene Info NP_082222 100
R.norvegicus Dcaf7 303602   NP_001100527 100
A.gambiae AgaP_AGAP000678 1272444   XP_311206 87
D.melanogaster CG14614 33131   NP_608461 86
C.elegans swan-2 179875   NP_506417 64
A.thaliana ATAN11 837849   NP_172751 63
A.thaliana LWD2 822276   NP_189298 61

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)