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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. COL14A1, collagen, type XIV, alpha 1
Sequence ID:NM_021110
Entrez Gene ID:7373
Ensembl ID:ENSG00000187955

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8q23Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:8: 121137376 - 121290451

 Exon Info From UCSC:
NM_021110

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9021761Full LengthBC140893collagen, type XIV, alpha 1
6188985IncompleteBC083495collagen, type XIV, alpha 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_066933  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_021110 NP_066933 Q05707 fn3
VWA
Collagen

Related Sequences

 
mRNAGenPeptSwissProt
M64108 AAA36794 Q05707
M64109 AAA36795 Q05707
BC014640 AAH14640 Q05707
BC036192 AAH36192 Q4G0W3
BC083495 AAH83495 Q05707
BC140893 AAI40894 Q05707
AK293080 BAF85769 A8KAL5
Y11709 CAA72401 Q05707
Y11710 CAA72402 Q05707
Y11711 CAA72403 Q05707

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens COL14A1 NP_066933 M.musculus Col14a1 12818 Gene Info NP_851794 90
R.norvegicus Col14a1 314981   NP_001124020 89

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)