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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. AGPAT1, 1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, alpha)
Sequence ID:NM_006411
NM_032741
Entrez Gene ID:10554
Ensembl ID:ENSG00000204310

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:6p21.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 32135988 - 32139157

 Exon Info From UCSC:
NM_006411
NM_032741

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2822348Full LengthBC0024021-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, alpha)
2822348Full LengthBC0030071-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, alpha)
3627439Full LengthBC0043101-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, alpha)
6169543Full LengthBC0908491-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, alpha)
3448169IncompleteBC0068181-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, alpha)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_116130  NP_006402  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_006411 NP_006402 Q99943 EC 2.3.1.51 Acyltransferase
NM_032741 NP_116130 Q99943 EC 2.3.1.51 Acyltransferase

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
U56417 AAB58775 Q99943 EC 2.3.1.51
U75971 AAB96378 Q99943 EC 2.3.1.51
AF007145 AAC19153 Q71VH6  
AF218034 AAG17276 Q9HBM8  
BC002402 AAH02402 Q99943 EC 2.3.1.51
BC003007 AAH03007 Q99943 EC 2.3.1.51
BC004310 AAH04310 Q99943 EC 2.3.1.51
BC090849 AAH90849 Q99943 EC 2.3.1.51
AK056346 BAG51685 B3KPH3  
AK299252 BAG61283 B4DRH1  
AK315950 BAH14321 Q9HBM8  
Y09565 CAA70758 Q99943 EC 2.3.1.51

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens AGPAT1 NP_006402 R.norvegicus Agpat1 406165   NP_997623 94
M.musculus Agpat1 55979 Gene Info NP_001156851 93
D.melanogaster CG3812 32230   NP_572828 41
A.gambiae AgaP_AGAP002021 1281097   XP_321034 40
C.elegans acl-2 179398   NP_505578 37

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)