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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. ATP5O, ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit
Sequence ID:NM_001697
Entrez Gene ID:539
Ensembl ID:ENSG00000241837

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:21q22.11Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:21: 35275756 - 35284676

NM_001697 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
111963527575735275942
1972833527623835276324
2843963527964435279756
3975263528138535281514
5276373528459235284702
6386883528675335286803
6898153528803135288157

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4103001Full LengthBC022865ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit
4126036Full LengthBC021233ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001688  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001697 NP_001688 P48047 OSCP

Related Sequences

 
mRNAGenPeptSwissProt
BC021233 AAH21233 P48047
BC022865 AAH22865 P48047
BT019836 AAV38639 P48047
JF432864 ADZ16081  
AK222608 BAD96328 Q53HH2
AK222962 BAD96682 P48047
AK311796 BAG34739 P48047
X83218 CAA58219 P48047
CR456822 CAG33103 P48047

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ATP5O NP_001688 M.musculus Atp5o 28080 Gene Info NP_613063 82
R.norvegicus Atp5o 192241   NP_620238 82
A.gambiae AgaP_AGAP003599 1274263   XP_313357 50
D.melanogaster Oscp 41845   NP_524358 49
C.elegans atp-3 172195   NP_001021421 43
S.pombe atp5 2539241   NP_588505 40
N.crassa NCU01606 3872665   XP_956517 39
A.thaliana ATP5 831186   NP_196849 36
S.cerevisiae ATP5 851892   NP_010584 35

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)