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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. KCNJ10, potassium inwardly-rectifying channel, subfamily J, member 10
Sequence ID:NM_002241
RefSeqGene ID:NG_016411
Entrez Gene ID:3766
Ensembl ID:ENSG00000177807

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
DEAFNESS, AUTOSOMAL RECESSIVE 4, WITHENLARGED VESTIBULAR AQUEDUCTFOXI1
SLC26A4
SESAME SYNDROME 

Cytogenetic Location (from UniGene)

Cytogenetic Location:1q23.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 160011182 - 160039957

NM_002241 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
195083160007257160012321
50845323160039811160040050

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40118533Full LengthBC131627potassium inwardly-rectifying channel, subfamily J, member 10
4811633IncompleteBC034036potassium inwardly-rectifying channel, subfamily J, member 10
4814643IncompleteBC037840potassium inwardly-rectifying channel, subfamily J, member 10

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002232  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_002241 NP_002232 P78508 IRK

Related Sequences

 
mRNAGenPeptSwissProt
U52155 AAB07046 Q547K1
P78508
U73193 AAC50924 P78508
BC034036 AAH34036 P78508
BC131627 AAI31628 P78508
DQ892392 ABM83318  
DQ895607 ABM86533  
AK312383 BAG35301 B2R604

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens KCNJ10 NP_002232 M.musculus Kcnj10 16513 Gene Info NP_001034573 99
R.norvegicus Kcnj10 29718   NP_113790 95

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)