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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. GOLPH3, golgi phosphoprotein 3 (coat-protein)
Sequence ID:NM_022130
Entrez Gene ID:64083
Ensembl ID:ENSG00000113384

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:5p13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 32124827 - 32174245

NM_022130 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
119193212482332126741
192020343213567732135791
203521663214385432143985
216726763217391532174424

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4428707Full LengthBC063586golgi phosphoprotein 3 (coat-protein)
4558305Full LengthBC012123golgi phosphoprotein 3 (coat-protein)
4999629Full LengthBC033725golgi phosphoprotein 3 (coat-protein)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_071413  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_022130 NP_071413 Q9H4A6 GPP34

Related Sequences

 
mRNAGenPeptSwissProt
BC012123 AAH12123 Q9H4A6
BC033725 AAH33725 Q9H4A6
BC063586 AAH63586 Q9H4A6
AK075156 BAC11438 Q9H4A6
AK057544 BAG51933 B3KQ71
AK075077 BAG52061 B3KQJ9
AK092604 BAG52580 B3KS18
AK128510 BAG54686 B3KQJ9
AK293368 BAG56882 B4DDX1
AK301588 BAG63078 B4DWL6
AL133078 CAB61398 Q9H4A6
AJ296152 CAC13124 Q9H4A6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens GOLPH3 NP_071413 M.musculus Golph3 66629 Gene Info NP_079949 99
R.norvegicus Golph3 78961   NP_076467 99
A.gambiae AgaP_AGAP012606 1267437   XP_305994 73
A.gambiae AgaP_AGAP012632 1268965   XP_307546 73
D.melanogaster l(2)s5379 33402   NP_001014460 73
C.elegans Y47G6A.18 171919   NP_491172 72
S.pombe SPAC5D6.13 3361544   NP_001018235 48
N.crassa NCU06091 3875700   XP_959553 47
S.cerevisiae VPS74 851978   NP_010660 43

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)