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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CNTNAP1, contactin associated protein 1
Sequence ID:NM_003632
Entrez Gene ID:8506
Ensembl ID:ENSG00000108797

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17q21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 40834716 - 40851157

 Exon Info From UCSC:
NM_003632

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100064164Full LengthBC160132contactin associated protein 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003623  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_003632 NP_003623 P78357 EGF
F5_F8_type_C
Laminin_G_2

Related Sequences

 
mRNAGenPeptSwissProt
U87223 AAB48481 P78357
BC160132 AAI60132  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CNTNAP1 NP_003623 R.norvegicus Cntnap1 84008   NP_114450 94
M.musculus Cntnap1 53321 Gene Info NP_058062 93

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)