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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PKDCC, protein kinase domain containing, cytoplasmic
Sequence ID:NM_138370
Entrez Gene ID:91461
Ensembl ID:ENSG00000162878

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2p21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 42281279 - 42285656

NM_138370 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
18184227516042275977
8199414228037842280500
94212134228117542281446
121412934228208042282159
129414014228242542282532
140215754228436042284533
157624994228474242285665

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30529646Full LengthBC094697protein kinase-like protein SgK493
40031755Full LengthBC110513protein kinase-like protein SgK493
40031756Full LengthBC110514protein kinase-like protein SgK493
4139786IncompleteBC007901protein kinase-like protein SgK493
5022327IncompleteBC062988protein kinase-like protein SgK493

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_138370 NP_612379 Q504Y2  

Related Sequences

 
mRNAGenPeptSwissProt
BC007901 AAH07901 Q504Y2
BC062988 AAH62988 Q504Y2
BC094697 AAH94697 Q504Y2
BC110513 AAI10514 Q504Y2
BC110514 AAI10515 Q504Y2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PKDCC NP_612379 M.musculus Pkdcc 106522 Gene Info NP_598878 93
R.norvegicus Pkdcc 313860   NP_001101477 92

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)