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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. DDX6, DEAD (Asp-Glu-Ala-Asp) box helicase 6
Sequence ID:NM_001257191
NM_004397
Entrez Gene ID:1656
Ensembl ID:ENSG00000110367

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebrum, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, testis, thymus, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:11q23.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 118618474 - 118620081


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6163439Full LengthBC065007DEAD (Asp-Glu-Ala-Asp) box polypeptide 6

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_004388  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001257191 NP_001244120      
NM_004397 NP_004388 P26196 EC 3.6.4.13 DEAD
Helicase_C

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC039826 AAH39826 Q8IV96  
BC065007 AAH65007 P26196 EC 3.6.4.13
HQ448157 ADQ32638    
D17532 BAA04482 P26196 EC 3.6.4.13
AK313244 BAG36055 B2R858  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens DDX6 NP_004388 R.norvegicus Ddx6 500988   NP_001102762 98
M.musculus Ddx6 13209 Gene Info NP_001104296 98
A.gambiae AgaP_AGAP009135 1280091   XP_319893 76
S.pombe ste13 2541216   NP_596324 73
D.melanogaster me31B 34364   NP_523533 73
C.elegans cgh-1 176061   NP_498646 72
N.crassa NCU06149 3876149   XP_960011 68
A.thaliana RH8 828042   NP_191975 68
P.falciparum PFC0915w 814522   XP_001351278 67
S.cerevisiae DHH1 851394   NP_010121 67

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)