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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. OTOA, Otoancorin
Sequence ID:NM_144672
NM_001161683
NM_170664
RefSeqGene ID:NG_012973
Entrez Gene ID:146183
Ensembl ID:ENSG00000155719

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:16p12.2|16p12.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 21716283 - 21772049

 Exon Info From UCSC:
NM_144672
NM_001161683
NM_170664

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40128985Full LengthBC129993otoancorin
5500439IncompleteBC038458otoancorin
40128977IncompleteBC129992otoancorin

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001161683 NP_001155155    
NM_144672 NP_653273    
NM_170664 NP_733764    

Related Sequences

 
mRNAGenPeptSwissProt
BC038458 AAH38458 Q05BM7
BC129992 AAI29993 A2VDI0
BC129993 AAI29994 A1L3A8
AK093062 BAC04040 Q7RTW8
AK125840 BAG54255 Q7RTW8
AK302733 BAG63950 B4DZ38
BK000099 DAA00022 Q7RTW8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens OTOA NP_653273 R.norvegicus Otoa 499260   XP_574553 79
M.musculus Otoa 246190 Gene Info NP_647471 77

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)