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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Hs. ICT1, immature colon carcinoma transcript 1
Sequence ID:NM_001545
Entrez Gene ID:3396
Ensembl ID:ENSG00000167862

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

Cytogenetic Location (from UniGene)

Cytogenetic Location:17q25.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 73008768 - 73017356

NM_001545 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4418983Full LengthBC015335immature colon carcinoma transcript 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001536  

Protein Infomation

NM_001545 NP_001536 Q14197 EC RF-1

Related Sequences

BC015335 AAH15335 Q14197 EC
BT007111 AAP35775 Q14197 EC
DQ890655 ABM81581    
DQ893834 ABM84760    
AK222553 BAD96273 Q14197 EC
AK314138 BAG36828 Q14197 EC
X81788 CAA57387 Q14197 EC

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
H.sapiens ICT1 NP_001536 M.musculus Ict1 68572 Gene Info NP_081005 80
R.norvegicus Ict1 303673   XP_221110 80
A.gambiae AgaP_AGAP008425 1277552   XP_317020 45
D.melanogaster CG6094 34446   NP_609416 43
C.elegans R02F2.9 259963   NP_498174 40
A.thaliana AT1G62850 842585   NP_001077760 38

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)