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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. LRRK1, Leucine-rich repeat kinase 1
Sequence ID:NM_024652
Entrez Gene ID:79705
Ensembl ID:ENSG00000154237

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:15q26.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:15: 101562671 - 101610311

 Exon Info From UCSC:
NM_024652

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100069140Full LengthBC172446leucine-rich repeat kinase 1
3463078IncompleteBC005408leucine-rich repeat kinase 1
5193448IncompleteBC110293leucine-rich repeat kinase 1
6165604IncompleteBC066655leucine-rich repeat kinase 1
9007214IncompleteBC146769leucine-rich repeat kinase 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_078928  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_024652 NP_078928 Q38SD2 EC 2.7.11.1 Pkinase
Pkinase_Tyr

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC005408 AAH05408 Q9BS11  
BC066655 AAH66655 Q38SD2 EC 2.7.11.1
BC068080 AAH68080 Q38SD2 EC 2.7.11.1
BC146769 AAI46770 A6H8V9  
BC172446 AAI72446 Q38SD2 EC 2.7.11.1
DQ013130 AAY67799 Q38SD2 EC 2.7.11.1
AK026772 BAB15547 Q38SD2 EC 2.7.11.1
AB058693 BAB47419 Q38SD2 EC 2.7.11.1
AK131075 BAC85125 Q38SD2 EC 2.7.11.1
AK130975 BAC85472 Q38SD2 EC 2.7.11.1
AK054662 BAG51407 B3KNP5  
AK094556 BAG52887 B3KSX5  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens LRRK1 NP_078928 M.musculus Lrrk1 233328 Gene Info NP_666303 89
R.norvegicus Lrrk1 308703   XP_218760 88

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)