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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ASB3, ankyrin repeat and SOCS box containing 3
Sequence ID:NM_001201965
NM_016115
NM_145863
Entrez Gene ID:51130
Ensembl ID:ENSG00000115239

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, peripheral nervous system, pineal gland, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:2p16.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 53897455 - 54014038

 Exon Info From UCSC:
NM_016115
NM_145863

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3537359Full LengthBC006488ankyrin repeat and SOCS box-containing 3
4052577Full LengthBC009569ankyrin repeat and SOCS box-containing 3
5764788Full LengthBC110915ankyrin repeat and SOCS box-containing 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_057199  NP_665862  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001164165 NP_001157637    
NM_001201965 NP_001188894    
NM_006794 NP_006785 O95800  
NM_016115 NP_057199 Q9Y575 Ank
SOCS_box
NM_145863 NP_665862   Ank
SOCS_box

Related Sequences

 
mRNAGenPeptSwissProt
AF072693 AAD19849 O95800
AF156778 AAD41895 Q9Y575
BC006488 AAH06488 Q9Y575
BC009569 AAH09569 Q9Y575
BC067475 AAH67475 O95800
BC067476 AAH67476 O95800
BC110915 AAI10916 Q2TAI4
DQ893253 ABM84179  
DQ896582 ABM87581  
AK000985 BAA91455 Q9Y575
AK001283 BAA91599 Q9Y575
AB209795 BAD93032 Q59EL6
AK222595 BAD96315 Q53HI5
AK222715 BAD96435 Q53H66
AK314885 BAG37399 O95800
AK056069 BAG51615 Q9Y575
AK303133 BAG64238 B4DZX6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ASB3 NP_057199 H.sapiens GPR75-ASB3 100302652   NP_001157637 100
M.musculus Asb3 65257 Gene Info NP_076395 84

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)