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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. DSG4, desmoglein 4
Sequence ID:NM_001134453
NM_177986
RefSeqGene ID:NG_013040
Entrez Gene ID:147409
Ensembl ID:ENSG00000175065

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:18q12.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:18: 28956845 - 28993880

 Exon Info From UCSC:
NM_001134453
NM_177986

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40146929Full LengthBC132907desmoglein 4
40146931Full LengthBC132909desmoglein 4
4822945IncompleteBC039098desmoglein 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_817123  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001134453 NP_001127925    
NM_177986 NP_817123 Q86SJ6 Cadherin

Related Sequences

 
mRNAGenPeptSwissProt
BC039098 AAH39098 Q86SJ6
BC132907 AAI32908 Q86SJ6
BC132909 AAI32910 Q86SJ6
AY168788 AAO43657 Q86SJ6
AY177664 AAO47078 Q86SJ6
AY227350 AAP45000 Q86SJ6
AY228236 AAP49811 Q86SJ6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens DSG4 NP_001127925 M.musculus Dsg4 16769 Gene Info NP_853543 81
R.norvegicus Dsg4 291754   NP_955784 81

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)