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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. RAB18, RAB18, member RAS oncogene family
Sequence ID:NM_001256410
NM_001256411
NM_001256412
NM_001256415
NM_021252
NR_046172
RefSeqGene ID:NG_032035
Entrez Gene ID:22931
Ensembl ID:ENSG00000099246

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:10p12.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:10: 27817444 - 27828758

Transcript StartTranscript EndChromosomal Start Chromosomal End
11182779324827793365
1191742779880327798858
1752362781575627815817
2373092782143527821507
3104282782266327822781
4294952782285627822922
49627882782680427829096

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3922029Full LengthBC015014RAB18, member RAS oncogene family
4819866Full LengthBC029350RAB18, member RAS oncogene family

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_067075  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001256410 NP_001243339    
NM_001256411 NP_001243340    
NM_001256412 NP_001243341    
NM_001256415 NP_001243344    
NM_021252 NP_067075 Q9NP72 Ras

Related Sequences

 
mRNAGenPeptSwissProt
AF137372 AAF61433 Q9NP72
AF136974 AAG49435 Q9NP72
BC015014 AAH15014 Q9NP72
BC029350 AAH29350 Q9NP72
AF498950 AAM21098 Q9NP72
AF532968 AAP85637 Q7Z5D3
BT009840 AAP88842 Q9NP72
AF087860 AAP97170 Q9NP72
AY574034 AAU08232 Q9NP72
AB209698 BAD92935 Q59EW3
AK223153 BAD96873 Q9NP72
AK001555 BAG50939 Q9NP72
AK295443 BAH12069 B7Z333
AK297629 BAH12635 B7Z4P9
AK299457 BAH13039 B7Z5V3
AL136734 CAB66668 Q9NP72
CR533455 CAG38486 Q9NP72
AM393142 CAL38020  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RAB18 NP_067075 M.musculus Rab18 19330 Gene Info NP_851415 99
R.norvegicus Rab18 307039   NP_001012486 99
C.elegans rab-18 175272   NP_741092 69
A.gambiae AgaP_AGAP010875 1271081   XP_309827 64
A.thaliana RABC2A 831810   NP_568121 59
A.thaliana RAB18 840987   NP_001117435 57
A.thaliana RABC2b 820149   NP_001189850 54
D.melanogaster Rab-RP4 44360   NP_524744 53
P.falciparum rab18 2655310   XP_001349449 49

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)