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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. HIST1H2AA, Histone cluster 1, H2aa
Sequence ID:NM_170745
Entrez Gene ID:221613
Ensembl ID:ENSG00000164508

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6p22.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 25726320 - 25726790

NM_170745 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
25002572629125726789

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6614487Full LengthBC062211histone cluster 1, H2aa

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_734466  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_170745 NP_734466 Q96QV6 Histone

Related Sequences

 
mRNAGenPeptSwissProt
BC062211 AAH62211 Q96QV6
HQ447550 ADQ32036  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens HIST1H2AA NP_734466 A.gambiae AgaP_AGAP003913 1278737   XP_318365 89
A.thaliana HTA7 832829   NP_198119 70

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)