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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. NQO1, NAD(P)H dehydrogenase, quinone 1
Sequence ID:NM_000903
NM_001025433
NM_001025434
RefSeqGene ID:NG_011504
Entrez Gene ID:1728
Ensembl ID:ENSG00000181019

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, skin, stem cell, stomach, synovium, t-cell, testis, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:16q22.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 69744743 - 69760445

 Exon Info From UCSC:
NM_000903
NM_001025433
NM_001025434

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3349257Full LengthBC007659NAD(P)H dehydrogenase, quinone 1
6463260IncompleteBC107739NAD(P)H dehydrogenase, quinone 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001020605  NP_001020604  NP_000894  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_000903 NP_000894 P15559 EC 1.6.5.2 Flavodoxin_2
NM_001025433 NP_001020604     Flavodoxin_2
NM_001025434 NP_001020605     Flavodoxin_2

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
J03934 AAA59940 P15559 EC 1.6.5.2
BC007659 AAH07659 P15559 EC 1.6.5.2
BC107739 AAI07740 Q3B792  
DQ892892 ABM83818    
DQ896139 ABM87138    
AK223050 BAD96770 Q53G81  
AK312368 BAG35286 P15559 EC 1.6.5.2
AK297125 BAG59630 B4DLR8  
AK297979 BAG60289 P15559 EC 1.6.5.2
AK298896 BAG61007 B4DQP5  
AK316246 BAH14617 P15559 EC 1.6.5.2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens NQO1 NP_000894 M.musculus Nqo1 18104 Gene Info NP_032732 86
R.norvegicus Nqo1 24314   NP_058696 85

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta