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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. ATP5B, ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide
Sequence ID:NM_001686
Entrez Gene ID:506
Ensembl ID:ENSG00000110955

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:12q13.13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 57031962 - 57039768

NM_001686 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
172635703196057032206
2644655703288957033090
4666785703376357033975
6798015703624157036363
8029605703645657036614
96111455703718657037370
114612675703762057037741
126814425703856457038738
144316255703895457039136
162618575703962057039851

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2900336Full LengthBC016512ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001677  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001686 NP_001677 P06576 EC 3.6.3.14 ATP-synt_ab
ATP-synt_ab_C
ATP-synt_ab_N

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC016512 AAH16512 P06576 EC 3.6.3.14
DQ403107 ABD77240 Q0QEN7  
DQ891585 ABM82511    
DQ894779 ABM85705    
AK291085 BAF83774 P06576 EC 3.6.3.14
X05606 CAA29095 P06576 EC 3.6.3.14

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ATP5B NP_001677 M.musculus Atp5b 11947 Gene Info NP_058054 96
R.norvegicus Atp5b 171374   NP_599191 96
D.melanogaster ATPsyn-beta 43829   NP_726631 90
A.gambiae AgaP_AGAP012081 1280592   XP_320446 86
A.gambiae AgaP_AGAP012106 1280570   XP_320423 86
C.elegans atp-2 175716   NP_498111 83
S.pombe atp2 2541927   NP_593151 80
S.cerevisiae ATP2 853585   NP_012655 80
N.crassa NCU05430 3879401   XP_963253 80
P.falciparum PFL1725w 811397   XP_001350751 77
A.thaliana AT5G08670 830768   NP_568203 76
A.thaliana AT5G08690 830770   NP_568204 76
A.thaliana AT5G08680 830769   NP_680155 75

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)